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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794020.1_cds_XP_016436505.1_3149
CDS Infomation

[gene=LOC107762637] [db_xref=GeneID:107762637] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X2] [protein_id=XP_016436505.1] [location=join(75870..75981,76093..76267,77966..78037,78146..78214,78321..78392,79067..79138,79243..79314,79588..79659,79786..79857,79942..80013,80126..80197,80757..80828,80935..81000,81265..81330,81413..81451,81604..81662,82103..82497,82586..82781,83281..83433,84096..84214,84630..84840,84972..85212,85748..85898,86137..86508)] [gbkey=CDS]
Sequence

ATGAGCATGATGCTTCTTAAATCTGCATTCTCTTCTTCTCTTTTGTTAGTTTTCTTCACA
GTTTACTGTTTAGCAGCCACTAATTCTAAGTCCAAGCTCCATCCAGCAGAAGTGAAAGCA
TTGAAAGAGATAGCCAAAAAGCTTGGGAAAAGAGATTGGGATTTTAACAAGGATCCTTGC
AGTGGAGAAGGAAATTGGAGTGTTGCAGTTACTGTTAAAGGACTTGAGAGTTCTGTTGCT
TGTGATTGCTCTTTTAACAACAATTCTACCTGCCATGTTACCTCCATAGCTCTGAAAGCA
CAGAATATTTCAGCAAATGTTCCACCAGAATTCGCTCAACTTCGGCATCTTAAGCAGTTG
GACCTCAGTCGTAATTATCTCAATGGTTCAATCCCGTCTCAGTGGGCGTCACTGCGCTTG
CTTGGCCTCTCTGTTATGGGAAACCACTTGTCTGGTCCATTTCCAAAAGTTCTCACCAAA
ATCCCTACGCTTAGGAACCTGAGTATTGAAGGAAACAGATTTTCAGGATCAATTCCTCCA
GAAATTGGCAACTTGGTTCATATGGAAAAGCTCGTGTTGTCGTCAAATGAGTTCACCGGA
GCTTTGCCACCCACATTGGACAAGCTAACCAACTTAACTGATTTGAGGATAAGTGACAAC
AATTTCACTGGAAAGATACCAAAATTTATCAGCAACTGGACAAAAATTGAGAAACTGCAT
ATACAAGGCTGTTCTCTGGAGGGTCCTATCCCTTCTGCTATATCTTCCCTTACCAGCTTA
ATTGATTTAAGGATCAGTGACCTAAAAAGTGGAAAATCTGGTTTTCCACCATTAGATAAT
CTAGAATCCATGAAAGTACTAATACTAAGGAAGTGCTTAATTCATGGTGAGATTCCTGAA
TATATAGGGGACATGAAGAAATTGAAGACACTGGACCTTAGTTTTAACAGCTTGTCTGGT
GAGATCCCGTCATCTTTTGTACACCTATCCAAAGTAGATTTTATGTATTTGACAGGAAAC
AAACTTACTGGACCTGTTCCTGGGTGGATTTTATCAAGAAATAAGAATGTAGACGTTTCG
TATAACAATTTTACATGGGAAACCACAGCACCTATTGAATGTCCGCGTGGAAGTGTAAAC
TTGGTGGAGAGCTACTCTGCGTTGGGACAAGAATCAAACAAAGTTCATCCTTGCCTGAAG
CATGATTTCCCTTGTTCGGAACCAACAAATAAGCAAGAGTATTCTTTGTACATCAATTGT
GGAGGCAAGGAAGTATCAATCAAGAATGGTACAAGCCGCAAAACATATGAAGCTGATTTA
GAAGCCAGAGGTGCTTCTATGTATTATTCAAGACATAACTGGGCATTTAGCAGCACAGGA
AATTTCATGGATAATGACGTTGATTCTGATGTCTATATCGACACCAATGTCTCTGCCCTG
CTTAATGTCAAGGCTCCAGAAGTTGAACTATACAAAACTGCACGTGCATCTCCCCTCTCC
CTCACATATTATGGACAGTGTCTAATGAATGGAAACTATACTGTCAAGCTCCATTTTGCG
GAGATAATATTCACAAATGATACTTCATTCAACAGTCTTGGAGAGCGGATATTTGATGTC
TACTTGCAGGAAAAATTGGTGTTGAAGGATTTTAACATTGCAAAAGAAGCTGGTGGGCCG
GCTAAGCCCATTGTGAAGACTTTCAGTGCAGCTGTGACAAGCCACACGCTGAAGATCCAT
TTTTACTGGGCAGGAAAGGGGACTACAGGAATTCCCGTTAGAGGGGTTTATGGTCCTCTA
ATTTCAGCTATATCAGTGGATCCTAATTTTACACCTCCTTTGCCTGCCACTCAACGGAGT
AAAATTCATGTTGGCATATTGGCCGGGGCAATAGCTGGATCGCTGTTTCTTTTCCTTCTG
ATCATTGGTATCTTGTATAAGACAGGCTGTCTTGGAGAAAAAGTATCTGCTGATAAAGAA
CTTCAAGGACTGGATCTACAAGCTGGACTATTTACTCTCAGACAGATTAAAGCCGCGACA
AAGAATTTTGACCCAGCAAACAAGATAGGGGAAGGTGGTTTCGGTTCAGTTTATAAGGGT
CTATTATCTGATGGAACATTAATAGCAGTGAAGCAACTTTCTTCAAAGTCAAAACAAGGA
ACTAGAGAATTTTTGAATGAAGTAGGTATGATATCTGCAGTACAGCATCCGAATCTCGTA
AAGCTTTATGGATGTTGCATTCAAGGAAATCAATTATTATTAGTGTACGAGTACATGGAA
AATAACTGTGTATCTCGTGCTCTTTTTGGCAAAGGACCAATCTGCAAAATGAAATTAGAC
TGGCCGACACGAAGGAAAATTTGCCTAGGAATTGCAAGAGGTTTAGCGTACCTTCATGAG
GAGTCAAGCATGAAGATAGTCCACAGAGATATCAAGACCAGTAATATTTTGCTTGACAAG
GACTTCAATCCTAAAATATCAGATTTTGGCTTGGCGAAGCTCCATGAGGATGATAATACC
CATATTAGTACACGGATTGCAGGAACTGTGGGTTACATGGCTCCAGAATATGCAATGCGC
GGCTACTTAACTAGTAAAGCAGATATTTACAGCTATGGAGTTGTTGCATTGGAGATTGTT
AGTGGGAAAAGCAATACAAATTATAGGCCAGCGGAAGATTGTGTTTATCTTCTTGACTGG
GCTTATGTTATGCAAGAGCGCGGAAGTATATTGGAATTGGTTGATCCAGACTTAGGTTCC
AACTACTCAGCACAAGAAGCAATGGTGGTACTAAATGTTGCACTTTCATGCACTAATGCA
TCTCCAACACTTAGACCAACAATGTCTCAAGTGGTAAGCATGCTTGAAGGCCAAACTCTC
GTTCAAGATGTCCTTTCTGATCCAGGGATTTCAACAACCGGTTCAGGATTCAGATCGATG
AGAAGTCACTTCTGGCAGACTCAAAGCCTGTCAACTGATGGTACGCGTACTGATTCCACT
GTCTCAATTGGAGATGGAGAAGAAACTGTTATACTTCAAAGAGTTGAATCTTCTGTACTA
TCCAATAAGTAA

Peptide Sequence

PEP ID

XP_016436505.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X2 [Nicotiana tabacum]
Sequence

MSMMLLKSAFSSSLLLVFFTVYCLAATNSKSKLHPAEVKALKEIAKKLGKRDWDFNKDPC
SGEGNWSVAVTVKGLESSVACDCSFNNNSTCHVTSIALKAQNISANVPPEFAQLRHLKQL
DLSRNYLNGSIPSQWASLRLLGLSVMGNHLSGPFPKVLTKIPTLRNLSIEGNRFSGSIPP
EIGNLVHMEKLVLSSNEFTGALPPTLDKLTNLTDLRISDNNFTGKIPKFISNWTKIEKLH
IQGCSLEGPIPSAISSLTSLIDLRISDLKSGKSGFPPLDNLESMKVLILRKCLIHGEIPE
YIGDMKKLKTLDLSFNSLSGEIPSSFVHLSKVDFMYLTGNKLTGPVPGWILSRNKNVDVS
YNNFTWETTAPIECPRGSVNLVESYSALGQESNKVHPCLKHDFPCSEPTNKQEYSLYINC
GGKEVSIKNGTSRKTYEADLEARGASMYYSRHNWAFSSTGNFMDNDVDSDVYIDTNVSAL
LNVKAPEVELYKTARASPLSLTYYGQCLMNGNYTVKLHFAEIIFTNDTSFNSLGERIFDV
YLQEKLVLKDFNIAKEAGGPAKPIVKTFSAAVTSHTLKIHFYWAGKGTTGIPVRGVYGPL
ISAISVDPNFTPPLPATQRSKIHVGILAGAIAGSLFLFLLIIGILYKTGCLGEKVSADKE
LQGLDLQAGLFTLRQIKAATKNFDPANKIGEGGFGSVYKGLLSDGTLIAVKQLSSKSKQG
TREFLNEVGMISAVQHPNLVKLYGCCIQGNQLLLVYEYMENNCVSRALFGKGPICKMKLD
WPTRRKICLGIARGLAYLHEESSMKIVHRDIKTSNILLDKDFNPKISDFGLAKLHEDDNT
HISTRIAGTVGYMAPEYAMRGYLTSKADIYSYGVVALEIVSGKSNTNYRPAEDCVYLLDW
AYVMQERGSILELVDPDLGSNYSAQEAMVVLNVALSCTNASPTLRPTMSQVVSMLEGQTL
VQDVLSDPGISTTGSGFRSMRSHFWQTQSLSTDGTRTDSTVSIGDGEETVILQRVESSVL
SNK

Transcript Sequence

Gene sequence data has not been registered.